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Nature Methods:西湖大学申怀宗/原发杰开发冷冻电镜AI基础模型,“一键式”洞见生命分子结构
生物世界· 2025-11-28 04:05
Core Viewpoint - The article discusses the development of an AI foundation model, Cryo-IEF, and an automated data processing tool, CryoWizard, aimed at revolutionizing cryo-electron microscopy (cryo-EM) image processing, making it more accessible and efficient for researchers [2][3][15]. Group 1: Cryo-EM Technology Overview - Cryo-EM allows for the capture of three-dimensional images of biological macromolecules at atomic resolution, significantly advancing structural biology research [2][5]. - Traditional cryo-EM data processing is complex, time-consuming, and heavily reliant on expert experience, which poses challenges in the field [6][8]. Group 2: Development of Cryo-IEF and CryoWizard - Cryo-IEF is the first AI foundation model specifically designed for cryo-EM image processing, trained on approximately 65 million particle images from over 100 types of biological macromolecules [16]. - CryoWizard is a fully automated, end-to-end data processing workflow that allows users to obtain high-resolution three-dimensional structures from raw cryo-EM images without manual intervention [12][17]. Group 3: Impact and Future Prospects - The introduction of Cryo-IEF and CryoWizard is expected to lower the barriers to using advanced cryo-EM technology, enabling more research teams, including smaller labs, to explore core molecular mechanisms in their fields [15]. - This development exemplifies the synergistic relationship between artificial intelligence and experimental science, where vast experimental data trains powerful AI models, which in turn enhance the efficiency and quality of scientific research [15].
复旦大学最新Cell子刊:DeepSeek-R1、GPT-4等大语言模型可增强肺癌筛查的临床决策
生物世界· 2025-11-28 04:05
Core Insights - Lung cancer is one of the most aggressive and prevalent cancers globally, with an estimated 2.2 million new cases and 1.8 million deaths in 2020, leading to a five-year survival rate of less than 10% due to late-stage diagnosis [2] Group 1: Research Findings - A multi-center benchmarking study evaluated six large language models (LLMs) for clinical decision support in lung cancer screening, revealing that Claude 3 Opus had the highest readability, while GPT-4 achieved the highest clinical accuracy [3][7] - The study involved a cross-sectional analysis of 148 anonymized low-dose computed tomography (LDCT) reports from three medical institutions, assessing the performance of LLMs in providing management recommendations for incidental lung nodules [6][8] - The results indicated that the performance differences among LLMs were not significant across different hospital reports, highlighting their robustness and practicality in various medical environments [7][10] Group 2: Implications for Clinical Practice - The findings suggest that LLMs could enhance clinical decision support in lung cancer screening, particularly in managing incidental findings from LDCT scans, which is a pressing challenge in cancer screening management [6][10] - The study underscores the potential of LLMs to assist outpatient physicians in making timely decisions regarding follow-up interventions or surveillance strategies for lung nodules [5][6]
付巧妹团队最新Nature论文:通过古DNA解码4000年前石峁古城的人群来源、父系社会结构与殉葬习俗
生物世界· 2025-11-28 04:05
Core Viewpoint - The research on the Shimao archaeological site reveals significant insights into the social structure, kinship practices, and cultural continuity of Neolithic China, highlighting the complexity of early state formation and societal organization in the region [5][22]. Group 1: Archaeological Findings - The Shimao site, dating back to approximately 2300-1800 BC, covers an area of 4 square kilometers, equivalent to 560 standard football fields, featuring robust defensive structures and evidence of social stratification [8]. - Archaeologists discovered over 80 sacrificial skulls beneath the eastern city gate, indicating a highly complex social organization and religious practices within Shimao society [8]. Group 2: Genetic Research Insights - A large-scale genomic study involving 169 ancient human bone samples confirmed that the Shimao cultural population primarily descended from the late Yangshao culture of northern Shaanxi, establishing a continuity in cultural and population development [5][10]. - The research also identified genetic influences from southern agricultural populations, suggesting that the northward expansion of rice cultivation may have reached the Loess Plateau earlier than previously thought [11]. Group 3: Kinship and Social Structure - The study successfully reconstructed a four-generation family tree, revealing a patrilineal social structure where property and status were primarily inherited through the male line, while maternal lineages were more diverse [14]. - The presence of gender-specific burial practices was noted, with male sacrificial victims predominantly found in public ritual contexts, while female sacrifices were associated with elite burials, indicating complex ritual systems [19]. Group 4: Social Hierarchy and Gender Roles - Despite a rigid social hierarchy, genetic analysis showed instances of kinship between elite and lower-status individuals, suggesting some permeability in social boundaries [21]. - The discovery of high-status female burials with comparable grave goods to male elites indicates that women could attain significant social status and political power within Shimao society [21]. Group 5: Implications for Early Civilization - This research provides crucial insights into the formation of early states in China, emphasizing the multifaceted and locally developed nature of early civilization, characterized by social stratification, complex rituals, and active inter-regional exchanges [22]. - The findings from Shimao challenge traditional narratives of Chinese civilization's origins, offering a new perspective on the evolution of human societies in the region over 4000 years ago [22].
南昌大学发表最新Science论文
生物世界· 2025-11-28 00:00
Core Insights - The article discusses a breakthrough in perovskite solar technology, highlighting the use of laser annealing to improve crystal growth while preventing environmental degradation [2][3][4]. Group 1: Research Findings - A study published in the journal Science demonstrates that laser annealing can create crystalline perovskite films under ambient conditions, avoiding degradation products typically produced during thermal annealing [2]. - The research identified a degradation-free window lasting approximately 123 ± 18 seconds, during which the effects of water and oxygen are effectively mitigated [3]. - The use of nanosecond laser for 25 seconds of annealing achieved a record 24% power conversion efficiency for a 100 cm² rigid perovskite solar module, surpassing previous scalability records [2][4]. Group 2: Technical Details - The laser annealing process utilizes a wavelength of 455 nm and a power density of 20 W/cm², which is two orders of magnitude higher than traditional thermal annealing methods [3]. - The study also revealed that this method prevents the accumulation of hexagonal perovskite phases, which can negatively impact performance [3][4]. - The achieved efficiencies include 24.0% for rigid components and 20.7% for flexible components, demonstrating a significant advancement in the field [4].
华人学者一天发表了7篇Nature论文
生物世界· 2025-11-27 10:18
Core Insights - The article highlights the publication of 22 papers in the prestigious journal Nature on November 26, with 7 authored by Chinese scholars, showcasing the significant contributions of Chinese researchers in various scientific fields [3][5][7][9][11][12][14][16]. Group 1: Research Contributions - Celine Chen from Rockefeller University published a paper on thalamocortical transcriptional gates and memory stabilization [3]. - Michael M. Shen and Lu Chao from Columbia University co-authored a study on NSD2 targeting in prostate cancer, addressing plasticity and drug resistance [5]. - A team from Zhejiang University, including academicians Cai Xiujun and Yang Wei, published research on mechanical transmission and robotic operation [7]. - Liang Wanqi from Shanghai Jiao Tong University co-authored a paper on how ethylene modulates cell wall mechanics in response to soil compaction [9]. - Research by Fu Qiaomei from the Chinese Academy of Sciences focused on ancient DNA from Shimao city, revealing kinship practices in Neolithic China [11][12]. - A study from the Shanghai Artificial Intelligence Laboratory on glasses-free 3D displays using deep learning was also published [14]. - The Chinese University of Science and Technology, represented by academicians Du Jiangfeng and Wang Ya, published research on entanglement-enhanced nanoscale single-spin sensing [16].
去世两年后,上海交大教授论文登上Nature
生物世界· 2025-11-27 08:30
Core Viewpoint - The article discusses the global issue of soil compaction exacerbated by modern agricultural practices, highlighting the need for crop varieties with enhanced root penetration capabilities to ensure food security [3][4]. Group 1: Soil Compaction and Its Impact - Soil compaction, intensified by the use of large agricultural machinery and excessive fertilizer, leads to a significant reduction in crop yields, with potential losses reaching up to 75% due to drought stress combined with soil compaction [3]. - Compacted soil has high particle density and low porosity, severely hindering root growth and development [3]. Group 2: Research Findings - A research team from Shanghai Jiao Tong University and other institutions published a study in Nature, revealing how plants adapt to compacted soil by modulating ethylene levels to regulate cell wall mechanics, promoting root thickening and penetration [4][11]. - The study identifies a key regulatory pathway involving ethylene, OsARF1, and cellulose synthase, which is crucial for root adaptation to soil compaction [10][11]. Group 3: Implications for Crop Development - The findings provide insights into the molecular mechanisms of plant adaptation to adverse conditions, paving the way for future crop designs that can better withstand soil compaction through precise manipulation of cell wall properties [11].
Nature Aging:新型CAR-T细胞疗法,逆转并预防衰老相关肠道问题
生物世界· 2025-11-27 04:11
Core Insights - The article discusses the development of a CAR-T cell therapy targeting uPAR, which has shown potential in reversing and preventing aging-related defects in intestinal regeneration and health [2][3][8]. Group 1: Research Background - Intestinal stem cells (ISCs) drive the rapid regeneration of intestinal epithelial cells, but aging significantly reduces their regenerative capacity, leading to decreased intestinal function and increased permeability [6]. - There is a pressing need to develop strategies that can restore ISC function, especially given the high incidence of intestinal diseases in the elderly [6]. Group 2: uPAR and Aging - Previous studies have linked the expression of uPAR to aging and various conditions such as liver fibrosis and lung injury, but its role in intestinal biology and regeneration has not been thoroughly explored [7]. - The latest research indicates that uPAR-positive cells accumulate in aging intestines, adversely affecting ISC function [8]. Group 3: CAR-T Cell Therapy Findings - The study demonstrated that CAR-T cells targeting uPAR improved intestinal barrier function, regenerative capacity, inflammation, mucosal immunity, and gut microbiome composition in aged mice [8]. - These findings provide conceptual validation for the potential of immune-based targeted cell therapies to promote tissue regeneration in aging individuals [8].
Cell重磅:华人学者证实,压力不仅让你掉头发,还会引发自身免疫,埋下长期脱发隐患
生物世界· 2025-11-27 04:11
Core Viewpoint - The article discusses the relationship between stress and hair loss, highlighting recent research that reveals the mechanisms by which acute stress can lead to hair follicle damage and subsequent autoimmune responses [3][18]. Group 1: Mechanisms of Stress-Induced Hair Loss - Chronic stress leads to the suppression of hair follicle stem cell activation, resulting in hair loss due to prolonged resting phases of hair follicles [2]. - Acute stress causes immediate hair loss by activating the sympathetic nervous system, which leads to necrosis of rapidly dividing hair follicle transit-amplifying cells (HF-TAC) [3][19]. - The necrosis of HF-TAC releases cellular debris that triggers macrophage-mediated clearance and activates dendritic cells, which can lead to the activation of autoreactive T cells that attack hair follicles in the future [3][15]. Group 2: Observations from Research - The research utilized mouse models to study the effects of acute stress on hair follicles, revealing that stress significantly impacts HF-TAC while sparing hair follicle stem cells (HFSC) [7][9]. - The study found that stress-induced hair loss is closely linked to the sympathetic nervous system rather than solely relying on stress hormones like adrenaline [10][19]. - The inflammatory response following necrosis differs from normal hair follicle regression, as it involves necrosis rather than apoptosis, leading to a more pronounced inflammatory reaction [12][13]. Group 3: Long-Term Implications of Stress - The findings suggest that stress not only causes immediate hair loss but may also initiate autoimmune processes, with necrotic hair follicle cells releasing self-antigens that activate autoreactive CD8+ T cells [15][18]. - Even after hair follicles recover from initial stress, these activated T cells can persist and attack hair follicles upon subsequent inflammatory stimuli, explaining the sensitivity to future hair loss [15][20]. - The research emphasizes the importance of managing stress levels for individuals with alopecia or a family history of autoimmune diseases, as it may help prevent disease recurrence [20][21].
中山大学最新Cell子刊:AI能够帮助医生克服技术障碍,但存在依赖风险
生物世界· 2025-11-27 04:11
Core Insights - The article discusses the integration of interdisciplinary research in fields such as biology, chemistry, and computer science, highlighting its role in advancing digital medicine and healthcare services [2] - Despite the potential of technologies like artificial intelligence (AI) in biomedicine, their widespread application is hindered by technical barriers and limited expertise among physicians [2][5] - A recent study demonstrated that large language models (LLMs) can assist physicians in overcoming these technical challenges, although concerns about dependency and misinformation remain [3][6] Study Findings - A randomized controlled trial involving 64 primary ophthalmologists showed that the use of LLMs like ChatGPT-3.5 significantly improved project completion rates from 25% to 87.5% [5][7] - After a two-week washout period, 41.2% of successful intervention participants were able to complete new projects independently without LLM support [5][7] - The study identified potential risks associated with LLMs, including the tendency for physicians to rely on AI-generated information without full understanding [5][9] Implications - The findings suggest that LLMs can democratize medical AI research by helping physicians navigate design, execution, and reporting challenges [9] - However, the long-term risks of dependency on LLMs warrant further investigation to ensure safe and effective use in clinical settings [6][9]
中国科学技术大学发表最新Nature论文
生物世界· 2025-11-27 00:18
Core Viewpoint - The article discusses a significant advancement in quantum sensing technology, specifically through the use of entangled nitrogen-vacancy (NV) centers to enhance single-spin detection capabilities, overcoming limitations posed by environmental noise and sensor volume [3][5]. Group 1 - The research team from the University of Science and Technology of China, led by Academician Du Jiangfeng and Professor Wang Ya, published a paper in the journal Nature on November 26, 2025, focusing on entanglement-enhanced nanoscale single-spin sensing [4]. - The proposed entanglement-enhanced sensing scheme demonstrates a 3.4 times increase in sensitivity and a 1.6 times improvement in spatial resolution compared to single NV centers under environmental conditions [5]. - This innovative approach utilizes carefully designed entangled states to amplify target spin signals while suppressing environmental noise, enabling the observation of random transitions between different spin states [5].